[DOCKTESTERS] Fwd: DKFZ bias filter docker

Francis Ouellette francis at oicr.on.ca
Tue Oct 18 03:32:02 EDT 2016


Dennis and Brian: this is for you. (from today’s tech call)

@bffo


--
B.F. Francis Ouellette          http://oicr.on.ca/person/francis-ouellette



Begin forwarded message:

From: Ivo Buchhalter <i.buchhalter at dkfz-heidelberg.de<mailto:i.buchhalter at dkfz-heidelberg.de>>
Subject: [DOCKTESTERS] DKFZ bias filter docker
Date: October 18, 2016 at 12:06:10 AM PDT
To: <docktesters at lists.icgc.org<mailto:docktesters at lists.icgc.org>>
Cc: "Werner, Johannes" <j.werner at dkfz-heidelberg.de<mailto:j.werner at dkfz-heidelberg.de>>, prinz <m.prinz at dkfz-heidelberg.de<mailto:m.prinz at dkfz-heidelberg.de>>, "Schlesner, Matthias" <m.schlesner at Dkfz-Heidelberg.de<mailto:m.schlesner at Dkfz-Heidelberg.de>>

Dear dockertesters,

I was told to contact you regarding the DKFZ bias filter docker. The
docker is basically ready and it also passed internal testing. The
scripts and Dockerfile can be found here:
https://github.com/eilslabs/DKFZBiasFilter
Johannes and Manuel (CCed) have been working on bringing it into
Dockstore (they ran into a NFS problem). Johannes is currently on
vacation (until October 23rd).
Please let me know if it is sufficient to have the docker available on
Dockstore some time next week. Alternatively it might be possible that
you work with the scripts and Dockerfile on GitHub. If none of this
works I (or probably Manuel) can also try to get it running on Dockstore
some time later this week.

Best,
Ivo

PS: Sorry to the DKFZ people the email before bounced back because the link of the email address on the Wiki had a typo.
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