[DOCKTESTERS] Delly workflow version in Dockstore

Miguel Vazquez mikisvaz at gmail.com
Wed Apr 26 06:47:24 EDT 2017


Hi all,

I'm trying to clarify the status of the Delly-DKFZ workflow testing. As far
as I remember we found some discrepancies in CNV and SV that apparently
traced back to changes in the Delly workflow.  After that I admit I must
have lost track and I don't remember addressing any updates. I now see 3
different Delly workflows in Dockstore

https://dockstore.org/containers/registry.hub.docker.com/francescof/pcawg_delly_workflow
https://dockstore.org/containers/registry.hub.docker.com/francescof/finsen_delly_workflow
https://dockstore.org/containers/quay.io/pancancer/pcawg_delly_workflow

The last one is the one I used, more precisely version 2.0.1-cwl1.0

Should I change to a different one?

Best regards

Miguel
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